Hi. I have this exact motor. Let me know if you don't come right. I ended up completely removing the rubber connector plugs between the power packs and coils as the connections were always a little questionable.
I left the other larger plugs after confirming that the connections were 100 percent correct.
As papyson said you want to try and narrow this down to either a coil,plug, plug wire, power pack or coil. This is effectively done by swapping parts out from one side of the motor to other until you notice the problem moves or you can generate spark in all cylinders.
good luck.